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Publications

Publications from our faculty. In order to find a specific publication, use the search box below to search by author, title, journal or date.

December 8, 2014
Nature Methods
DNA nanoswitches: a quantitative platform for gel-based biomolecular interaction analysis.

Koussa MA, Halvorsen K, Ward A, Wong WP
October 22, 2015
Stroke
Shear-Activated Nanoparticle Aggregates Combined With Temporary Endovascular Bypass to Treat Large Vessel Occlusion.

Marosfoi MG, Korin N, Gounis MJ, Uzun O, Vedantham S, Langan ET, Papa AL, Brooks OW, Johnson C, Puri AS, Bhatta D, Kanapathipillai M, Bronstein BR, Chueh JY, Ingber DE, Wakhloo AK
September 7, 2015
Nature Methods
Cas9 gRNA engineering for genome editing, activation and repression.

Kiani S, Chavez A, Tuttle M, Hall RN, Chari R, Ter-Ovanesyan D, Qian J, Pruitt BW, Beal J, Vora S, Buchthal J, Kowal EJ, Ebrahimkhani MR, Collins JJ, Weiss R, Church G
September 14, 2015
Nature Materials
Matrix elasticity of void-forming hydrogels controls transplanted-stem-cell-mediated bone formation.

Huebsch N, Lippens E, Lee K, Mehta M, Koshy ST, Darnell MC, Desai RM, Madl CM, Xu M, Zhao X, Chaudhuri O, Verbeke C, Kim WS, Alim K, Mammoto A, Ingber DE, Duda GN, Mooney DJ
May 19, 2016
Cell
Rapid, Low-Cost Detection of Zika Virus Using Programmable Biomolecular Components

Pardee K, Green AA, Takahashi MK, Braff D, Lambert G, Lee JW, Ferrante T, Ma D, Donghia N, Fan M, Daringer NM, Bosch I, Dudley DM, O'Connor DH, Gehrke L, Collins JJ
September 23, 2015
Science Translational Medicine
A light-reflecting balloon catheter for atraumatic tissue defect repair.

Roche ET, Fabozzo A, Lee Y, Polygerinos P, Friehs I, Schuster L, Whyte W, Casar Berazaluce AM, Bueno A, Lang N, Pereira MJ, Feins E, Wasserman S, O'Cearbhaill ED, Vasilyev NV, Mooney DJ, Karp JM, Del Nido PJ, Walsh CJ
March 4, 2015
Nature
Liquid-based gating mechanism with tunable multiphase selectivity and antifouling behaviour.

Hou X, Hu Y, Grinthal A, Khan M, Aizenberg J
March 1, 2016
Trends in Biotechnology
Multiplexed Engineering in Biology

Jameson K. Rogers and George M. Church
February 8, 2016
PNAS
Genetically encoded sensors enable real-time observation of metabolite production

Jameson K. Rogers and George M. Church
July 5, 2016
Nature Nanotechnology
Optical imaging of individual biomolecules in densely packed clusters

Mingjie Dai, Ralf Jungmann & Peng Yin
November 16, 2015
Nature Biotechnology
Safeguarding CRISPR-Cas9 gene drives in yeast.

DiCarlo JE, Chavez A, Dietz SL, Esvelt KM, Church GM
May 18, 2016
Scientific Reports
Infused polymers for cell sheet release

Nidhi Juthani, Caitlin Howell, Haylea Ledoux, Irini Sotiri, Susan Kelso, Yevgen Kovalenko, Amanda Tajik, Thy L. Vu, Jennifer J. Lin, Amy Sutton & Joanna Aizenberg
July 26, 2015
Biomaterials
Improved treatment of systemic blood infections using antibiotics with extracorporeal opsonin hemoadsorption.

Didar TF, Cartwright MJ, Rottman M, Graveline AR, Gamini N, Watters AL, Leslie DC, Mammoto T, Rodas MJ, Kang JH, Waterhouse A, Seiler BT, Lombardo P, Qendro EI, Super M, Ingber DE
June 13, 2016
eBioMedicine
A broad-spectrum infection diagnostic that detects pathogen-associated molecular patterns (PAMPs) in whole blood

Mark Cartwrighta, Martin Rottmana, Nathan I. Shapiroc, Benjamin Seilera, Patrick Lombardoa, Nazita Gaminia, Julie Tomolonisa, Alexander L. Wattersa, Anna Waterhousea, Dan Lesliea, Dana Bolgena, Amanda Gravelinea, Joo Kanga, Tohid Didara, Nikolaos Dimitrakakisa, David Cartwrighta, Michael Supera, Donald E. Ingber
August 12, 2015
Nature Communications
Injectable cryogel-based whole-cell cancer vaccines.

Bencherif SA, Warren Sands R, Ali OA, Li WA, Lewin SA, Braschler TM, Shih TY, Verbeke CS, Bhatta D, Dranoff G, Mooney DJ
December 8, 2014
Nature Biotechnology
Injectable, spontaneously assembling, inorganic scaffolds modulate immune cells in vivo and increase vaccine efficacy.

Kim J, Li WA, Choi Y, Lewin SA, Verbeke CS, Dranoff G, Mooney DJ
October 28, 2015
Science
MICROBIOME. A unified initiative to harness Earth’s microbiomes.

Alicisatos AP, Blaser MJ, Brodie EL, Chun M, Dangl JL, Donohue TJ, Dorrestein PC, Gilbert JA, Green JL, Jansson JK, Knight R, Maxon ME, McFall-Ngai MJ, Miller JF, Pollard KS, Ruby EG, Taha SA, Silver PA, et. al.
December 16, 2014
PNAS
Evolution-guided optimization of biosynthetic pathways.

Raman S, Rogers JK, Taylor ND, Church GM
October 12, 2014
Nature Biotechnology
A bioinspired omniphobic surface coating on medical devices prevents thrombosis and biofouling.

Leslie DC, Waterhouse A, Berthet JB, Valentin TM, Watters AL, Jain A, Kim P, Hatton BD, Nedder A, Donovan K, Super EH, Howell C, Johnson CP, Vu TL, Bolgen DE, Rifai S, Hansen AR, Aizenberg M, Super M, Aizenberg J, Ingber DE
December 21, 2015
Nature Methods
Engineering an allosteric transcription factor to respond to new ligands.

Taylor ND, Garruss AS, Moretti R, Chan S, Arbing MA, Cascio D, Rogers JK, Isaacs FJ, Kosuri S, Baker D, Fields S, Church GM, Raman S