Publications

Publications from our faculty. In order to find a specific publication, use the search box below to search by author, title, journal or date.

April 21, 2021
Frontiers in Robotics and AI
Validating a Termite-Inspired Construction Coordination Mechanism Using an Autonomous Robot

Nicole E Carey, Paul Bardunias, Radhika Nagpal, Justin Werfel
May 12, 2021
Tissue Engineering Part A
Extracellular Matrix Alignment Directs Provisional Matrix Assembly and Three Dimensional Fibrous Tissue Closure

Shoshana L. Das, Prasenjit Bose, Emma Lejeune, Daniel H. Reich, Christopher Chen, and Jeroen Eyckmans
January 1, 2021
Cancer Research
Activatable Zymography Probes Enable In Situ Localization of Protease Dysregulation in Cancer

Ava P. Soleimany, Jesse D. Kirkpatrick, Susan Su, Jaideep S. Dudani, Qian Zhong, Ahmet Bekdemir and Sangeeta N. Bhatia
April 29, 2021
Nature
COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets

Toni M. Delorey, Carly G. K. Ziegler, Graham Heimberg, Rachelly Normand, Yiming Yang, Åsa Segerstolpe, Domenic Abbondanza, Stephen J. Fleming, Ayshwarya Subramanian, Daniel T. Montoro, Karthik A. Jagadeesh, Kushal K. Dey, Pritha Sen, Michal Slyper, Yered H. Pita-Juárez, Devan Phillips, Jana Biermann, Zohar Bloom-Ackermann, Nick Barkas, Andrea Ganna, James Gomez, Johannes C. Melms, Igor Katsyv, Erica Normandin, Pourya Naderi, Yury V. Popov, Siddharth S. Raju, Sebastian Niezen, Linus T.-Y. Tsai, Katherine J. Siddle, Malika Sud, Victoria M. Tran, Shamsudheen K. Vellarikkal, Yiping Wang, Liat Amir-Zilberstein, Deepak S. Atri, Joseph Beechem, Olga R. Brook, Jonathan Chen, Prajan Divakar, Phylicia Dorceus, Jesse M. Engreitz, Adam Essene, Donna M. Fitzgerald, Robin Fropf, Steven Gazal, Joshua Gould, John Grzyb, Tyler Harvey, Jonathan Hecht, Tyler Hether, Judit Jané-Valbuena, Michael Leney-Greene, Hui Ma, Cristin McCabe, Daniel E. McLoughlin, Eric M. Miller, Christoph Muus, Mari Niemi, Robert Padera, Liuliu Pan, Deepti Pant, Carmel Pe’er, Jenna Pfiffner-Borges, Christopher J. Pinto, Jacob Plaisted, Jason Reeves, Marty Ross, Melissa Rudy, Erroll H. Rueckert, Michelle Siciliano, Alexander Sturm, Ellen Todres, Avinash Waghray, Sarah Warren, Shuting Zhang, Daniel R. Zollinger, Lisa Cosimi, Rajat M. Gupta, Nir Hacohen, Hanina Hibshoosh, Winston Hide, Alkes L. Price, Jayaraj Rajagopal, Purushothama Rao Tata, Stefan Riedel, Gyongyi Szabo, Timothy L. Tickle, Patrick T. Ellinor, Deborah Hung, Pardis C. Sabeti, Richard Novak, Robert Rogers, Donald E. Ingber, Z. Gordon Jiang, Dejan Juric, Mehrtash Babadi, Samouil L. Farhi, Benjamin Izar, James R. Stone, Ioannis S. Vlachos, Isaac H. Solomon, Orr Ashenberg, Caroline B. M. Porter, Bo Li, Alex K. Shalek, Alexandra-Chloé Villani, Orit Rozenblatt-Rosen & Aviv Regev
May 3, 2021
Nature Biomedical Engineering
A human-airway-on-a-chip for the rapid identification of candidate antiviral therapeutics and prophylactics

Longlong Si, Haiqing Bai, Melissa Rodas, Wuji Cao, Crystal Yuri Oh, Amanda Jiang, Rasmus Moller, Daisy Hoagland, Kohei Oishi, Shu Horiuchi, Skyler Uhl, Daniel Blanco-Melo, Randy A. Albrecht, Wen-Chun Liu, Tristan Jordan, Benjamin E. Nilsson-Payant, Ilona Golynker, Justin Frere, James Logue, Robert Haupt, Marisa McGrath, Stuart Weston, Tian Zhang, Roberto Plebani, Mercy Soong, Atiq Nurani, Seong Min Kim, Danni Y. Zhu, Kambez H. Benam, Girija Goyal, Sarah E. Gilpin, Rachelle Prantil-Baun, Steven P. Gygi, Rani K. Powers, Kenneth E. Carlson, Matthew Frieman, Benjamin R. tenOever & Donald E. Ingber
May 4, 2021
Lab on a Chip
Direct laser writing for cardiac tissue engineering: a microfluidic heart on a chip with integrated transducers

Rachael K Jayne, M Çağatay Karakan, Kehan Zhang, Noelle Pierce, Christos Michas, David J Bishop, Christopher S Chen, Kamil L Ekinci, Alice E White
April 21, 2021
Nature Communications
Force-FAK signaling coupling at individual focal adhesions coordinates mechanosensing and microtissue repair

Dennis W. Zhou, Marc A. Fernández-Yagüe, Elijah N. Holland, Andrés F. García, Nicolas S. Castro, Eric B. O’Neill, Jeroen Eyckmans, Christopher S. Chen, Jianping Fu, David D. Schlaepfer & Andrés J. García
April 21, 2021
Nature
Multistable inflatable origami structures at the metre scale

David Melancon, Benjamin Gorissen, Carlos J. García-Mora, Chuck Hoberman & Katia Bertoldi
May 4, 2021
PNAS
High-throughput functional variant screens via in vivo production of single-stranded DNA

Max G. Schubert, Daniel B. Goodman, Timothy M. Wannier, Divjot Kaur, Fahim Farzadfard, Timothy K. Lu, Seth L. Shipman, and George M. Church
September 9, 2020
Journal of American Chemical Society
Ultrasensitive Detection of Enzymatic Activity Using Single Molecule Arrays

Xu Wang, Alana F. Ogata, and David R. Walt
April 19, 2021
Nature Communications
Cytoplasmic condensation induced by membrane damage is associated with antibiotic lethality

Felix Wong, Jonathan M. Stokes, Bernardo Cervantes, Sider Penkov, Jens Friedrichs, Lars D. Renner & James J. Collins
April 27, 2021
PNAS
Transferrin receptor targeting by de novo sheet extension

Danny D Sahtoe, Adrian Coscia, Nur Mustafaoglu, Lauren M Miller, Daniel Olal, Ivan Vulovic, Ta-Yi Yu, Inna Goreshnik, Yu-Ru Lin, Lars Clark, Florian Busch, Lance Stewart, Vicki H Wysocki, Donald E Ingber, Jonathan Abraham, David Baker
April 7, 2021
Nature Methods
Low-N protein engineering with data-efficient deep learning

Surojit Biswas, Grigory Khimulya, Ethan C. Alley, Kevin M. Esvelt & George M. Church
April 7, 2021
Nature
The NIH Somatic Cell Genome Editing program

Krishanu Saha, Erik J. Sontheimer, P. J. Brooks, Melinda R. Dwinell, Charles A. Gersbach, David R. Liu, Stephen A. Murray, Shengdar Q. Tsai, Ross C. Wilson, Daniel G. Anderson, Aravind Asokan, Jillian F. Banfield, Krystof S. Bankiewicz, Gang Bao, Jeff W. M. Bulte, Nenad Bursac, Jarryd M. Campbell, Daniel F. Carlson, Elliot L. Chaikof, Zheng-Yi Chen, R. Holland Cheng, Karl J. Clark, David T. Curiel, James E. Dahlman, Benjamin E. Deverman, Mary E. Dickinson, Jennifer A. Doudna, Stephen C. Ekker, Marina E. Emborg, Guoping Feng, Benjamin S. Freedman, David M. Gamm, Guangping Gao, Ionita C. Ghiran, Peter M. Glazer, Shaoqin Gong, Jason D. Heaney, Jon D. Hennebold, John T. Hinson, Anastasia Khvorova, Samira Kiani, William R. Lagor, Kit S. Lam, Kam W. Leong, Jon E. Levine, Jennifer A. Lewis, Cathleen M. Lutz, Danith H. Ly, Samantha Maragh, Paul B. McCray Jr, Todd C. McDevitt, Oleg Mirochnitchenko, Ryuji Morizane, Niren Murthy, Randall S. Prather, John A. Ronald, Subhojit Roy, Sushmita Roy, Venkata Sabbisetti, W. Mark Saltzman, Philip J. Santangelo, David J. Segal, Mary Shimoyama, Melissa C. Skala, Alice F. Tarantal, John C. Tilton, George A. Truskey, Moriel Vandsburger, Jonathan K. Watts, Kevin D. Wells, Scot A. Wolfe, Qiaobing Xu, Wen Xue, Guohua Yi, Jiangbing Zhou & The SCGE Consortium
April 12, 2021
Nature Materials
Three-dimensional nanolithography guided by DNA modular epitaxy

Jie Shen, Wei Sun, Di Liu, Thomas Schaus & Peng Yin
April 14, 2021
Nature
Liquid-induced topological transformations of cellular microstructures

Shucong Li, Bolei Deng, Alison Grinthal, Alyssha Schneider-Yamamura, Jinliang Kang, Reese S. Martens, Cathy T. Zhang, Jian Li, Siqin Yu, Katia Bertoldi & Joanna Aizenberg
March 1, 2021
Biomedical Optics Express
Fast, multiplane line-scan confocal microscopy using axially distributed slits

Jean-Marc Tsang, Howard J. Gritton, Shoshana L. Das, Timothy D. Weber, Christopher S. Chen, Xue Han, and Jerome Mertz
April 6, 2021
Cell
Bioelectric signaling: Reprogrammable circuits underlying embryogenesis, regeneration, and cancer

Michael Levin
April 1, 2021
Nature Biomedical Engineering
The evolution of commercial drug delivery technologies

Ava M. Vargason, Aaron C. Anselmo & Samir Mitragotri
March 31, 2021
Science Robotics
A cellular platform for the development of synthetic living machines

Douglas Blackiston, Emma Lederer, Sam Kriegman, Simon Garnier, Joshua Bongard and Michael Levin