Publications

Publications from our faculty. In order to find a specific publication, use the search box below to search by author, title, journal or date.

Science Translational Medicine
Probiotic strains detect and suppress cholera in mice
Ning Mao, Andres Cubillos-Ruiz, D. Ewen Cameron, and James J. Collins
Nature Biomedical Engineering
Sustained release of targeted cardiac therapy with a replenishable implanted epicardial reservoir
William Whyte, Ellen T. Roche, Claudia E. Varela, Keegan Mendez, Shahrin Islam, Hugh O’Neill, Fiona Weafer, Reyhaneh Neghabat Shirazi, James C. Weaver, Nikolay V. Vasilyev, Peter E. McHugh, Bruce Murphy, Garry P. Duffy, Conor J. Walsh & David J. Mooney
3D Printing and Additive Manufacturing
From Improved Diagnostics to Presurgical Planning: High-Resolution Functionally Graded Multimaterial 3D Printing of Biomedical Tomographic Data Sets
Ahmed Hosny, Steven J. Keating, Joshua D. Dilley, Beth Ripley, Tatiana Kelil, Steve Pieper, Dominik Kolb, Christoph Bader, Anne-Marie Pobloth, Molly Griffin, Reza Nezafat, Georg Duda, Ennio A. Chiocca, James R. Stone, James S. Michaelson, Mason N. Dean, Neri Oxman, and James C. Weaver.
Science Advances
Making data matter: Voxel printing for the digital fabrication of data across scales and domains
Christoph Bader, Dominik Kolb, James C. Weaver, Sunanda Sharma, Ahmed Hosny, João Costa and Neri Oxman
Nature Biotechnology
Photosynthetic artificial organelles sustain and control ATP-dependent reactions in a protocellular system
Keel Yong Lee, Sung-Jin Park, Keon Ah Lee, Se-Hwan Kim, Heeyeon Kim, Yasmine Meroz, L Mahadevan, Kwang-Hwan Jung, Tae Kyu Ahn, Kevin Kit Parker & Kwanwoo Shin
Nature Biotechnology
High-throughput creation and functional profiling of DNA sequence variant libraries using CRISPR–Cas9 in yeast
Xiaoge Guo, Alejandro Chavez, Angela Tung, Yingleong Chan, Christian Kaas, Yi Yin, Ryan Cecchi, Santiago Lopez Garnier, Eric D Kelsic, Max Schubert, James E DiCarlo, James J Collins & George M Church
Development
Developmentally inspired human ‘organs on chips’
Donald E. Ingber
Nano Letters
Modulation of the Cellular Uptake of DNA Origami through Control over Mass and Shape
Maartje M. C. Bastings, Frances M. Anastassacos, Nandhini Ponnuswamy, Franziska G. Leifer, Garry Cuneo, Chenxiang Lin, Donald E. Ingber, Ju Hee Ryu, and William M. Shih
Clinical Pharmacology & Therapeutics
Organ‐on‐Chip Recapitulates Thrombosis Induced by an anti‐CD154 Monoclonal Antibody: Translational Potential of Advanced Microengineered Systems
Riccardo Barrile, Andries D. van der Meer, Hyoungshin Park, Jacob P. Fraser, Damir Simic, Fang Teng, David Conegliano, Justin Nguyen, Abhishek Jain, Mimi Zhou, Katia Karalis, Donald E. Ingber, Geraldine A. Hamilton, Monicah A. Otieno
Science
The principles of cascading power limits in small, fast biological and engineered systems.
Ilton M, Bhamla MS, Ma X, Cox SM, Fitchett LL, Kim Y, Koh JS, Krishnamurthy D, Kuo CY, Temel FZ, Crosby AJ, Prakash M, Sutton GP, Wood RJ, Azizi E, Bergbreiter S, Patek SN.
Cell
Universal Chimeric Antigen Receptors for Multiplexed and Logical Control of T Cell Responses.
Cho JH, Collins JJ, Wong WW.
Cellular and Molecular Gastroenterology and Hepatology
Microfluidic Organ-on-a-Chip Models of Human Intestine
Bein A, Shin W, Jalili-Firoozinezhad S, Park MH, Sontheimer-Phelps A, Tovaglieri A, Chalkiadaki A, Kim HJ, Ingber DE.
Journal of Organic Chemistry
Convergent Synthesis of Sialyl LewisX-O-Core-1 Threonine.
Sardar MYR, Mandhapati AR, Park S, Wever WJ, Cummings RD, Chaikof EL.
Genome Medicine
Enabling multiplexed testing of pooled donor cells through whole-genome sequencing
Yingleong Chan, Ying Kai Chan, Daniel B. Goodman, Xiaoge Guo, Alejandro Chavez, Elaine T. Lim and George M. Church
Cell
An Integrated Genome-wide CRISPRa Approach to Functionalize lncRNAs in Drug Resistance.
Bester AC, Lee JD, Chavez A, Lee YR, Nachmani D, Vora S, Victor J, Sauvageau M, Monteleone E, Rinn JL, Provero P, Church GM, Clohessy JG, Pandolfi PP.
Cancer Immunology Research
PPAR-γ contributes to immunity by cancer vaccines that secrete GM-CSF.
Goyal G, Wong K, Nirschl CJ, Souders N, Neuberg D, Anandasabapathy N, Dranoff G.
Advanced Healthcare Materials
Patient-Specific Bioinks for 3D Bioprinting of Tissue Engineering Scaffolds.
Faramarzi N, Yazdi IK, Nabavinia M, Gemma A, Fanelli A, Caizzone A, Ptaszek LM, Sinha I, Khademhosseini A, Ruskin JN, Tamayol A.
Journal of Dental Research
FGF2 Enhances Odontoblast Differentiation by αSMA+ Progenitors In Vivo.
Vidovic-Zdrilic I, Vining KH, Vijaykumar A, Kalajzic I, Mooney DJ, Mina M.
Methods in Molecular Biology
Rapid Prototyping of Thermoplastic Microfluidic Devices.
Novak R, Ng CF, Ingber DE.
Nature Communications
Prokaryotic nanocompartments form synthetic organelles in a eukaryote.
Lau YH, Giessen TW, Altenburg WJ, Silver PA.