Publications

Publications from our faculty. In order to find a specific publication, use the search box below to search by author, title, journal or date.

Journal of the American Chemical Society
High-Throughput Density Measurement Using Magnetic Levitation.
Ge S, Wang Y, Deshler NJ, Preston DJ, Whitesides GM.
Current Protocols in Chemical Biology
Characterizing Protein Kinase Substrate Specificity Using the Proteomic Peptide Library (ProPeL) Approach.
Lubner JM, Balsbaugh JL, Church GM, Chou MF, Schwartz D.
eLife
Current CRISPR gene drive systems are likely to be highly invasive in wild populations.
Noble C, Adlam B, Church GM, Esvelt KM, Nowak MA.
ACS Synthetic Biology
Tracking of Engineered Bacteria In Vivo Using Nonstandard Amino Acid Incorporation.
Praveschotinunt P, Dorval Courchesne NM, den Hartog I, Lu C, Kim JJ, Nguyen PQ, Joshi NS.
Physical Review Letters
Origins of Extreme Liquid Repellency on Structured, Flat, and Lubricated Hydrophobic Surfaces.
Daniel D, Timonen JVI, Li R, Velling SJ, Kreder MJ, Tetreault A, Aizenberg J.
Cell
Next-Generation Machine Learning for Biological Networks.
Camacho DM, Collins KM, Powers RK, Costello JC, Collins JJ.
Science Translational Medicine
Probiotic strains detect and suppress cholera in mice
Ning Mao, Andres Cubillos-Ruiz, D. Ewen Cameron, and James J. Collins
Nature Biomedical Engineering
Sustained release of targeted cardiac therapy with a replenishable implanted epicardial reservoir
William Whyte, Ellen T. Roche, Claudia E. Varela, Keegan Mendez, Shahrin Islam, Hugh O’Neill, Fiona Weafer, Reyhaneh Neghabat Shirazi, James C. Weaver, Nikolay V. Vasilyev, Peter E. McHugh, Bruce Murphy, Garry P. Duffy, Conor J. Walsh & David J. Mooney
Biomaterials
CD4 T-cells regulate angiogenesis and myogenesis.
Kwee BJ, Budina E, Najibi AJ, Mooney DJ.
3D Printing and Additive Manufacturing
From Improved Diagnostics to Presurgical Planning: High-Resolution Functionally Graded Multimaterial 3D Printing of Biomedical Tomographic Data Sets
Ahmed Hosny, Steven J. Keating, Joshua D. Dilley, Beth Ripley, Tatiana Kelil, Steve Pieper, Dominik Kolb, Christoph Bader, Anne-Marie Pobloth, Molly Griffin, Reza Nezafat, Georg Duda, Ennio A. Chiocca, James R. Stone, James S. Michaelson, Mason N. Dean, Neri Oxman, and James C. Weaver.
Science Advances
Making data matter: Voxel printing for the digital fabrication of data across scales and domains
Christoph Bader, Dominik Kolb, James C. Weaver, Sunanda Sharma, Ahmed Hosny, João Costa and Neri Oxman
Nature Biotechnology
Photosynthetic artificial organelles sustain and control ATP-dependent reactions in a protocellular system
Keel Yong Lee, Sung-Jin Park, Keon Ah Lee, Se-Hwan Kim, Heeyeon Kim, Yasmine Meroz, L Mahadevan, Kwang-Hwan Jung, Tae Kyu Ahn, Kevin Kit Parker & Kwanwoo Shin
Nature Biotechnology
High-throughput creation and functional profiling of DNA sequence variant libraries using CRISPR–Cas9 in yeast
Xiaoge Guo, Alejandro Chavez, Angela Tung, Yingleong Chan, Christian Kaas, Yi Yin, Ryan Cecchi, Santiago Lopez Garnier, Eric D Kelsic, Max Schubert, James E DiCarlo, James J Collins & George M Church
Development
Developmentally inspired human ‘organs on chips’
Donald E. Ingber
Nature Chemical Biology
Next-generation biocontainment systems for engineered organisms.
Lee JW, Chan CTY, Slomovic S, Collins JJ.
Analytical and Bioanalytical Chemistry
Towards Alternative Approaches for Coupling of a Soft Robotic Sleeve to the Heart.
Horvath MA, Varela CE, Dolan EB, Whyte W, Monahan DS, Payne CJ, Wamala IA, Vasilyev NV, Pigula FA, Mooney DJ, Walsh CJ, Duffy GP, Roche ET.
Nano Letters
Modulation of the Cellular Uptake of DNA Origami through Control over Mass and Shape
Maartje M. C. Bastings, Frances M. Anastassacos, Nandhini Ponnuswamy, Franziska G. Leifer, Garry Cuneo, Chenxiang Lin, Donald E. Ingber, Ju Hee Ryu, and William M. Shih
Analytical and Bioanalytical Chemistry
Mussel-inspired 3D fiber scaffolds for heart-on-a-chip toxicity studies of engineered nanomaterials.
Ahn S, Ardoña HAM, Lind JU, Eweje F, Kim SL, Gonzalez GM, Liu Q, Zimmerman JF, Pyrgiotakis G, Zhang Z, Beltran-Huarac J, Carpinone P, Moudgil BM, Demokritou P, Parker KK.
Nature Nanotechnology
Exploring the speed limit of toehold exchange with a cartwheeling DNA acrobat.
Li J, Johnson-Buck A, Yang YR, Shih WM, Yan H, Walter NG.
Biomaterials
Replenishable drug depot to combat post-resection cancer recurrence.
Brudno Y, Pezone MJ, Snyder TK, Uzun O, Moody CT, Aizenberg M, Mooney DJ.