Publications

Publications from our faculty. In order to find a specific publication, use the search box below to search by author, title, journal or date.

August 17, 2024
Biosensors and Bioelectronics
Organ chips with integrated multifunctional sensors enable continuous metabolic monitoring at controlled oxygen levels

Zohreh Izadifar, Berenice Charrez, Micaela Almeida, Stijn Robben, Kanoelani Pilobello, Janet van der Graaf-Mas, Susan L Marquez, Thomas C Ferrante, Kostyantyn Shcherbina, Russell Gould, Nina T LoGrande, Adama M Sesay, Donald E Ingber
September 5, 2024
Nature Communications
Rapid discovery and evolution of nanosensors containing fluorogenic amino acids

Erkin Kuru, Jonathan Rittichier, Helena de Puig, Allison Flores, Subhrajit Rout, Isaac Han, Abigail E. Reese, Thomas M. Bartlett, Fabio De Moliner, Sylvie G. Bernier, Jason D. Galpin, Jorge Marchand, William Bedell, Lindsey Robinson-McCarthy, Christopher A. Ahern, Thomas G. Bernhardt, David Z. Rudner, James J. Collins, Marc Vendrell & George M. Church
September 10, 2024
The Journal of Infectious Diseases
COVID-19 mRNA vaccines induce robust levels of IgG but limited amounts of IgA within the oronasopharynx of young children

Ying Tang, Brittany P Boribong, Zoe N Swank, Melina Demokritou, Maria A F Luban, Alessio Fasano, Michelle Du, Rebecca L Wolf, Joseph Griffiths, John Shultz, Ella Borberg, Sujata Chalise, Wanda I Gonzalez, David R Walt, Lael M Yonker, Bruce H Horwitz
June 5, 2024
Smart Medicine
Digital droplet RT-LAMP increases speed of SARS-CoV-2 viral RNA detection

Yuan Yuan, Perry Ellis, Ye Tao, Dimitri A. Bikos, Emma K. Loveday, Mallory M. Thomas, James N. Wilking, Connie B. Chang, Fangfu Ye, David A. Weitz
August 27, 2024
Nature Reviews Gastroenterology & Hepatology
Intestinal organ chips for disease modelling and personalized medicine

Alican Özkan, Nina Teresa LoGrande, Jessica F. Feitor, Girija Goyal & Donald E. Ingber
August 28, 2024
ACS Synthetic Biology
Algorithms for Autonomous Formation of Multicellular Shapes from Single Cells

Evan Appleton, Noushin Mehdipour, Tristan Daifuku, Demarcus Briers, Iman Haghighi, Michaël Moret, George Chao, Timothy Wannier, Anush Chiappino-Pepe, Jeremy Huang, Calin Belta, George M. Church
August 21, 2024
ACS Nano
Donepezil Nanoemulsion Induces a Torpor-like State with Reduced Toxicity in Nonhibernating Xenopus laevis Tadpoles

Maria Plaza Oliver, Erica Gardner, Tiffany Lin, Katherine Sheehan, Megan M. Sperry, Shanda Lightbown, Manuel Ramsés Martínez, Daniela del Campo, Haleh Fotowat, Michael Lewandowski, Takako Takeda, Alexander C. Pauer, Shruti Kaushal, Vaskar Gnyawali, Maria V. Lozano, Manuel J. Santander Ortega, Richard Novak, Michael Super, Donald E. Ingber
July 23, 2024
microPublication Biology
MicroBundlePillarTrack: A Python package for automated segmentation, tracking, and analysis of pillar deflection in cardiac microbundles

Hiba Kobeissi, Xining Gao, Samuel J DePalma, Jourdan K Ewoldt, Miranda C Wang, Shoshana L Das, Javiera Jilberto, David Nordsletten, Brendon M Baker, Christopher S Chen, Emma Lejeune
August 1, 2024
Chemistry A European Journal
Systems and Methods for Continuous Evolution of Enzymes

Anqi Chen, Xinge Diana Zhang, Aleksandra Đurđević Đelmaš, Dr. David A. Weitz, Dr. Karla Milcic
August 1, 2024
The Journal of Organic Chemistry
Insights Derived from the Synthesis of a Complex Core 2 Glycan

Bibek Dhakal, Appi Mandhapati, Simon Park, Lijun Sun, Elliot L. Chaikof
August 5, 2024
Computers in Biology and Medicine
Oscillatory phenomena in electrophysiological networks: The coupling between cell bioelectricity and transcription

Javier Cervera, José A Manzanares, Michael Levin, Salvador Mafe
August 2, 2024
Advanced Materials
Embedding Biomimetic Vascular Networks via Coaxial Sacrificial Writing into Functional Tissue

Paul P. Stankey, Katharina T. Kroll, Alexander J. Ainscough, Daniel S. Reynolds, Alexander Elamine, Ben T. Fichtenkort, Sebastien G.M. Uzel, Jennifer A. Lewis
June 21, 2024
Entropy
Evolutionary Implications of Self-Assembling Cybernetic Materials with Collective Problem-Solving Intelligence at Multiple Scales

Benedikt Hartl, Sebastian Risi, Michael Levin
July 29, 2024
PNAS
Matrix stiffness-dependent regulation of immunomodulatory genes in human MSCs is associated with the lncRNA CYTOR

Justin J Lim, Kyle H Vining, David J Mooney, Benjamin J Blencowe
July 31, 2024
Lab on a Chip
Efficient discovery of antibody binding pairs using a photobleaching strategy for bead encoding

Shira Roth, Tom Ferrante, David R Walt
July 29, 2024
Nature Biotechnology
Signal amplification by cyclic extension enables high-sensitivity single-cell mass cytometry

Xiao-Kang Lun, Kuanwei Sheng, Xueyang Yu, Ching Yeung Lam, Gokul Gowri, Matthew Serrata, Yunhao Zhai, Hanquan Su, Jingyi Luan, Youngeun Kim, Donald E. Ingber, Hartland W. Jackson, Michael B. Yaffe & Peng Yin
July 17, 2024
Colloids and Surfaces B: Biointerfaces
3D printing assisted surface patterning process on acrylated hydrogels for contact guidance of fibroblasts

Amrita Natarajan, Suntae Kim, Gerardo Hernandez Moreno, Jeroen Eyckmans, Christopher S Chen, Derrick Dean, Vineeth M Vijayan
July 11, 2024
Chem
Rapid, Multiplexed, and Enzyme-Free Nucleic Acid Detection Using Programmable Aptamer-Based RNA Switches

Zhaoqing Yan, Amit Eshed, Anli A Tang, Nery R Arevalos, Zachary M Ticktin, Soma Chaudhary, Duo Ma, Griffin McCutcheon, Yudan Li, Kaiyue Wu, Sanchari Saha, Jonathan Alcantar-Fernandez, Jose L Moreno-Camacho, Abraham Campos-Romero, James J Collins, Peng Yin, Alexander A Green
March 22, 2024
Bioengineering & Translational Medicine
Vaccine adjuvants for infectious disease in the clinic

Morgan Goetz, Naaz Thotathil, Zongmin Zhao, Samir Mitragotri
July 22, 2024
Nature Communications
Protective alleles and precision healthcare in crewed spaceflight

Lindsay A. Rutter, Matthew J. MacKay, Henry Cope, Nathaniel J. Szewczyk, JangKeun Kim, Eliah Overbey, Braden T. Tierney, Masafumi Muratani, Ben Lamm, Daniela Bezdan, Amber M. Paul, Michael A. Schmidt, George M. Church, Stefania Giacomello & Christopher E. Mason