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Publications

Publications from our faculty. In order to find a specific publication, use the search box below to search by author, title, journal or date.

June 20, 2024
Molecular Cell
A high-throughput synthetic biology approach for studying combinatorial chromatin-based transcriptional regulation

Miguel A Alcantar, Max A English, Jacqueline A Valeri, James J Collins
June 21, 2024
Biofabrication
A perfusable, vascularized kidney organoid-on-chip model

Katharina Kroll, Kimberly Homan, Sébastien G M Uzel, Mariana Mata, Kayla Wolf, Jonathan Eric Rubins, Jennifer A Lewis
June 22, 2024
Mass Spectrometry Based Single Cell Proteomics
Single-Cell Proteomics Analysis with Tecan Uno and SCREEN Workflow

Michael Lewandowski, Shad Morton, Matthew Blake, Erica Squires, Rushdy Ahmad, David R. Walt & Bogdan Budnik
June 20, 2024
Nature Methods
Collaborative ethics: innovating collaboration between ethicists and life scientists

Jeantine E. Lunshof & Julia Rijssenbeek
June 7, 2024
Nature Computational Science
Scalable design of orthogonal DNA barcode libraries

Gokul Gowri, Kuanwei Sheng & Peng Yin
June 8, 2024
Tissue Engineering and Regenerative Medicine
Motion-Accommodating Dual-Layer Hydrogel Dressing to Deliver Adipose-Derived Stem Cells to Wounds

Jun Yong Lee, Jie Hyun Kim, Benjamin R. Freedman & David J. Mooney
June 10, 2024
Nature Biomedical Engineering
Efficient site-specific integration of large genes in mammalian cells via continuously evolved recombinases and prime editing

Smriti Pandey, Xin D. Gao, Nicholas A. Krasnow, Amber McElroy, Y. Allen Tao, Jordyn E. Duby, Benjamin J. Steinbeck, Julia McCreary, Sarah E. Pierce, Jakub Tolar, Torsten B. Meissner, Elliot L. Chaikof, Mark J. Osborn & David R. Liu
June 11, 2024
Nature
The Space Omics and Medical Atlas (SOMA) and international astronaut biobank

Eliah G. Overbey, JangKeun Kim, Braden T. Tierney, Jiwoon Park, Nadia Houerbi, Alexander G. Lucaci, Sebastian Garcia Medina, Namita Damle, Deena Najjar, Kirill Grigorev, Evan E. Afshin, Krista A. Ryon, Karolina Sienkiewicz, Laura Patras, Remi Klotz, Veronica Ortiz, Matthew MacKay, Annalise Schweickart, Christopher R. Chin, Maria A. Sierra, Matias F. Valenzuela, Ezequiel Dantas, Theodore M. Nelson, Egle Cekanaviciute, Gabriel Deards, Jonathan Foox, S. Anand Narayanan, Caleb M. Schmidt, Michael A. Schmidt, Julian C. Schmidt, Sean Mullane, Seth Stravers Tigchelaar, Steven Levitte, Craig Westover, Chandrima Bhattacharya, Serena Lucotti, Jeremy Wain Hirschberg, Jacqueline Proszynski, Marissa Burke, Ashley Kleinman, Daniel J. Butler, Conor Loy, Omary Mzava, Joan Lenz, Doru Paul, Christopher Mozsary, Lauren M. Sanders, Lynn E. Taylor, Chintan O. Patel, Sharib A. Khan, Mir Suhail, Syed G. Byhaqui, Burhan Aslam, Aaron S. Gajadhar, Lucy Williamson, Purvi Tandel, Qiu Yang, Jessica Chu, Ryan W. Benz, Asim Siddiqui, Daniel Hornburg, Kelly Blease, Juan Moreno, Andrew Boddicker, Junhua Zhao, Bryan Lajoie, Ryan T. Scott, Rachel R. Gilbert, San-huei Lai Polo, Andrew Altomare, Semyon Kruglyak, Shawn Levy, Ishara Ariyapala, Joanne Beer, Bingqing Zhang, Briana M. Hudson, Aric Rininger, Sarah E. Church, Afshin Beheshti, George M. Church, Scott M. Smith, Brian E. Crucian, Sara R. Zwart, Irina Matei, David C. Lyden, Francine Garrett-Bakelman, Jan Krumsiek, Qiuying Chen, Dawson Miller, Joe Shuga, Stephen Williams, Corey Nemec, Guy Trudel, Martin Pelchat, Odette Laneuville, Iwijn De Vlaminck, Steven Gross, Kelly L. Bolton, Susan M. Bailey, Richard Granstein, David Furman, Ari M. Melnick, Sylvain V. Costes, Bader Shirah, Min Yu, Anil S. Menon, Jaime Mateus, Cem Meydan & Christopher E. Mason
June 10, 2024
Vaccine
Heterologous SARS-CoV-2 booster vaccine for individuals with hematological malignancies after a primary SARS-CoV-2 mRNA vaccine series

Amy C Sherman, Simon D van Haren, Ella Borberg, Zoe Swank, Muneerah Aleissa, Alexandra Tong, Rebecca Rooks, Urwah Kanwal, Hannah Levine, Bridget Yates, Natalie Izaguirre, Kevin Ryff, Sanya Thomas, Lindsey Parisi, Xiaofang Li, David R Walt, Ofer Levy, Stephen R Walsh, Nicolas C Issa, Lindsey R Baden
June 11, 2024
Nature Communications
Spatial multi-omics of human skin reveals KRAS and inflammatory responses to spaceflight

Jiwoon Park, Eliah G. Overbey, S. Anand Narayanan, JangKeun Kim, Braden T. Tierney, Namita Damle, Deena Najjar, Krista A. Ryon, Jacqueline Proszynski, Ashley Kleinman, Jeremy Wain Hirschberg, Matthew MacKay, Evan E. Afshin, Richard Granstein, Justin Gurvitch, Briana M. Hudson, Aric Rininger, Sean Mullane, Sarah E. Church, Cem Meydan, George Church, Afshin Beheshti, Jaime Mateus & Christopher E. Mason
June 11, 2024
Nature Microbiology
Longitudinal multi-omics analysis of host microbiome architecture and immune responses during short-term spaceflight

Braden T. Tierney, JangKeun Kim, Eliah G. Overbey, Krista A. Ryon, Jonathan Foox, Maria A. Sierra, Chandrima Bhattacharya, Namita Damle, Deena Najjar, Jiwoon Park, J. Sebastian Garcia Medina, Nadia Houerbi, Cem Meydan, Jeremy Wain Hirschberg, Jake Qiu, Ashley S. Kleinman, Gabriel A. Al-Ghalith, Matthew MacKay, Evan E. Afshin, Raja Dhir, Joseph Borg, Christine Gatt, Nicholas Brereton, Benjamin P. Readhead, Semir Beyaz, Kasthuri J. Venkateswaran, Kelly Wiseman, Juan Moreno, Andrew M. Boddicker, Junhua Zhao, Bryan R. Lajoie, Ryan T. Scott, Andrew Altomare, Semyon Kruglyak, Shawn Levy, George M. Church & Christopher E. Mason
June 12, 2024
Journal of the American Chemical Society
Total Synthesis of a PSGL-1 Glycopeptide Analogue for Targeted Inhibition of P-Selectin

Bibek Dhakal, Appi Mandhapati, Pradheep Eradi, Simon Park, Kirby Fibben, Kaicheng Li, Ashley DeYong, Samira Escopy, Geeta Karki, Diane D. Park, Carolyn A. Haller, Erbin Dai, Lijun Sun, Wilbur A. Lam, and Elliot L. Chaikof
June 12, 2024
Science Translational Medicine
Heterotypic immunity from prior SARS-CoV-2 infection but not COVID-19 vaccination associates with lower endemic coronavirus incidence

David J Bean, Janet Monroe, Yan Mei Liang, Ella Borberg, Yasmeen Senussi, Zoe Swank, Sujata Chalise, David Walt, Janice Weinberg, Manish Sagar
May 31, 2024
Soft Matter
Ultrasoft silicone gels with tunable refractive index for traction force microscopy

J Zsolt Terdik, David A Weitz, Frans Spaepen
June 3, 2024
Nature Biomedical Engineering
Subcutaneous biodegradable scaffolds for restimulating the antitumour activity of pre-administered CAR-T cells

David K. Y. Zhang, Joshua M. Brockman, Kwasi Adu-Berchie, Yutong Liu, Yoav Binenbaum, Irene de Lázaro, Miguel C. Sobral, Rea Tresa & David J. Mooney
May 23, 2024
ACS Applied Materials & Interfaces
Dendritic Cell Immune Modulation via Polyphenol Membrane Coatings

Morgan E. Janes, Kyung Soo Park, Alexander P. Gottlieb, Alexander Curreri, Kolade Adebowale, Jayoung Kim, and Samir Mitragotri
May 23, 2024
Advanced Materials
Self-Amputating and Interfusing Machines

Bilige Yang, Amir Mohammadi Nasab, Stephanie Woodman, Eugene Thomas, Liana Tilton, Michael Levin, Rebecca Kramer-Bottiglio
May 25, 2024
Communications Biology
Tardigrade secretory proteins protect biological structures from desiccation

Samuel Lim, Charles B. Reilly, Zeina Barghouti, Benedetto Marelli, Jeffrey C. Way & Pamela A. Silver
May 29, 2024
Nature
Work hardening in colloidal crystals

Seongsoo Kim, Ilya Svetlizky, David A. Weitz & Frans Spaepen
May 29, 2024
Nature Communications
Mucus production, host-microbiome interactions, hormone sensitivity, and innate immune responses modeled in human cervix chips

Zohreh Izadifar, Justin Cotton, Siyu Chen, Viktor Horvath, Anna Stejskalova, Aakanksha Gulati, Nina T. LoGrande, Bogdan Budnik, Sanjid Shahriar, Erin R. Doherty, Yixuan Xie, Tania To, Sarah E. Gilpin, Adama M. Sesay, Girija Goyal, Carlito B. Lebrilla & Donald E. Ingber

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