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Publications

Publications from our faculty. In order to find a specific publication, use the search box below to search by author, title, journal or date.

September 6, 2017
Nucleic Acids Research
A systematic comparison of error correction enzymes by next-generation sequencing.

Lubock NB, Zhang D, Sidore AM, Church GM, Kosuri S.
September 1, 2017
Soft Robotics
An Implantable Extracardiac Soft Robotic Device for the Failing Heart: Mechanical Coupling and Synchronization

Payne Christopher J., Wamala Isaac, Abah Colette, Thalhofer Thomas, Saeed Mossab, Bautista-Salinas Daniel, Horvath Markus A., Vasilyev Nikolay V., Roche Ellen T., Pigula Frank A., and Walsh Conor J
August 31, 2017
Cell Host & Microbe
Using Engineered Bacteria to Characterize Infection Dynamics and Antibiotic Effects In Vivo

Laura K. Certain, Jeffrey C. Way, Matthew J. Pezone, James J. Collins
August 30, 2017
Acta Biomaterialia
Hydrogel substrate stress-relaxation regulates the spreading and proliferation of mouse myoblasts.

Bauer A, Gu L, Kwee B, Li WA, Dellacherie M, Celiz AD, Mooney DJ.
August 30, 2017
Nature Reviews Genetics
Beyond editing to writing large genomes.

Chari R, Church GM.
August 29, 2017
Nature Communications
Matrix degradability controls multicellularity of 3D cell migration.

Trappmann B, Baker BM, Polacheck WJ, Choi CK, Burdick JA, Chen CS.
August 2, 2017
ChemCatChem
Bootstrapped biocatalysis: biofilm-derived materials as reversibly functionalizable multi-enzyme surfaces

Martin G. Nussbaumer, Peter Q Nguyen, Pei Kun R Tay, Alexander Naydich, Erisa Hysi, Zsofia Botyanszki, Neel S. Joshi
August 2, 2017
Journal of the Royal Society Interface
Controllable biomimetic birdsong

Aryesh Mukherjee, Shreyas Mandre, L. Mahadevan
August 28, 2017
Nature Cell Biology
ZSCAN10 expression corrects the genomic instability of iPSCs from aged donors.

Skamagki M, Correia C, Yeung P, Baslan T, Beck S, Zhang C, Ross CA, Dang L, Liu Z, Giunta S, Chang TP, Wang J, Ananthanarayanan A, Bohndorf M, Bosbach B, Adjaye J, Funabiki H, Kim J, Lowe S, Collins JJ, Lu CW, Li H, et al.
August 22, 2017
Methods in Molecular Biology
Imaging of Isolated Extracellular Vesicles Using Fluorescence Microscopy.

Ter-Ovanesyan D, Kowal EJK, Regev A, Church GM, Cocucci E.
August 22, 2017
Methods in Molecular Biology
Extracellular Vesicle Isolation and Analysis by Western Blotting.

Kowal EJK, Ter-Ovanesyan D, Regev A, Church GM.
August 18, 2017
Scientific Reports
Multi-tissue interactions in an integrated three-tissue organ-on-a-chip platform.

Skardal A, Murphy SV, Devarasetty M, Mead I, Kang HW, Seol YJ, Shrike Zhang Y, Shin SR, Zhao L, Aleman J, Hall AR, Shupe TD, Kleensang A, Dokmeci MR, Jin Lee S, Jackson JD, Yoo JJ, Hartung T, Khademhosseini A, Soker S, Bishop CE, Atala A.
August 17, 2017
Science
Preventing mussel adhesion using lubricant-infused materials

Shahrouz Amini, Stefan Kolle, Luigi Petrone, Onyemaechi Ahanotu, Steffi Sunny, Clarinda N. Sutanto, Shawn Hoon, Lucas Cohen, James C. Weaver, Joanna Aizenberg, Nicolas Vogel, Ali Miserez
August 15, 2017
PNAS
Three-dimensional biomimetic vascular model reveals a RhoA, Rac1, and N-cadherin balance in mural cell–endothelial cell-regulated barrier function

Stella Alimperti, Teodelinda Mirabella, Varnica Bajaj, William Polacheck, Dana M. Pirone, Jeremy Duffield, Jeroen Eyckmans, Richard K. Assoian, and Christopher S. Chen
August 17, 2017
Stem Cell Research
Mechanical induction of dentin-like differentiation by adult mouse bone marrow stromal cells using compressive scaffolds.

Hashmi B, Mammoto T, Weaver J, Ferrante T, Jiang A, Jiang E, Feliz J, Ingber DE.
August 17, 2017
ASME Journal of Medical Devices
Pop-Up MEMS One-Way Endobronchial Valve for Treatment of Chronic Obstructive Pulmonary Disease

R. Malka, J. Gafford, S. Springmeyer, R. Wood
August 11, 2017
Advanced Materials
Tough Self-Healing Elastomers by Molecular Enforced Integration of Covalent and Reversible Networks

Jinrong Wu, Li-Heng Cai, David A. Weitz
July 24, 2017
ACS Synthetic Biology
A Synthetic Circuit for Mercury Bioremediation Using Self-Assembling Functional Amyloids

Pei Kun R. Tay, Peter Q. Nguyen, and Neel S. Joshi
August 14, 2017
Biomaterials Science
In vitro and in vivo analysis of visible light crosslinkable gelatin methacryloyl (GelMA) hydrogels.

Noshadi I, Hong S, Sullivan KE, Shirzaei Sani E, Portillo-Lara R, Tamayol A, Shin SR, Gao AE, Stoppel WL, Black Iii LD, Khademhosseini A, Annabi N.
August 9, 2017
PNAS
Lethality of MalE-LacZ hybrid protein shares mechanistic attributes with oxidative component of antibiotic lethality.

Takahashi N, Gruber CC, Yang JH, Liu X, Braff D, Yashaswini CN, Bhubhanil S, Furuta Y, Andreescu S, Collins JJ, Walker GC.