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Publications

Publications from our faculty. In order to find a specific publication, use the search box below to search by author, title, journal or date.

March 26, 2025
ACS Applied Materials & Interfaces
Electrical Impedance Correlated to Flow Rate in Elastomeric Valves: An Analog Material Memory

Joel Dungan, Juanita Mathews, Jeffrey T. Borenstein, Michael Levin, Valencia Koomson
March 13, 2025
ACS Synthetic Biology
XanthoMoClo─A Robust Modular Cloning Genetic Toolkit for the Genera Xanthobacter and Roseixanthobacter

Maximillian P. M. Soltysiak, Audrey L. H. Ory, Andrew D. Lee, Caroline E. Christophersen, Amogh P. Jalihal, Michael Springer
March 17, 2025
Journal of Extracellular Vesicles
Toward Identification of Markers for Brain-Derived Extracellular Vesicles in Cerebrospinal Fluid: A Large-Scale, Unbiased Analysis Using Proximity Extension Assays

Maia Norman, Adnan Shami-shah, Sydney C. D'Amaddio, Benjamin G. Travis, Dmitry Ter-Ovanesyan, Tyler J. Dougan, David R. Walt
March 6, 2025
NPJ Precision Oncology
LINE-1 ORF1p expression occurs in clear cell ovarian carcinoma precursors and is a candidate blood biomarker

Pamela R. de Santiago, Sho Sato, Stephanie J. Zhang, Meaghan C. Dougher, Kyle M. Devins, Agnes J. Bilecz, Sagar Rayamajhi, Gabriel Mingo, Hannah S. Rendulich, Yi Feng, Connie Wu, Martin S. Taylor, Yelena Zhuravlev, Euihye Jung, Dalia K. Omran, Tian-Li Wang, Ie-Ming Shih, Lauren E. Schwartz, Sarah Kim, Mark A. Morgan, Janos L. Tanyi, Kathleen H. Burns, Ernst Lengyel, Carlos Parra-Herran, Andrew K. Godwin, David R. Walt & Ronny Drapkin
March 6, 2025
biosensors
An Antimicrobial and Antifibrotic Coating for Implantable Biosensors

Sofia Wareham-Mathiassen, Pawan Jolly, Nandhinee Radha Shanmuga, Badrinath Jagannath, Pranav Prabhala, Yunhao Zhai, Alican Ozkan, Arash Naziripour, Rohini Singh, Henrik Bengtsson,Thomas Bjarnsholt, and Donald E. Ingber
February 24, 2025
Nature Protocols
Circular Vectors as an efficient, fully synthetic, cell-free approach for preparing small circular DNA as a plasmid substitute for guide RNA expression in CRISPR–Cas9 genome editing

Roman Teo Oliynyk & George M. Church
March 3, 2025
PNAS
Vimentin undergoes liquid-liquid phase separation to form droplets which wet and stabilize actin fibers

Arkaprabha Basu, Tommy Krug, Benjamin du Pont, Qiaoling Huang, Sijie Sun, Stephen A Adam, Robert D Goldman, David A Weitz
February 17, 2025
Communicative & Integrative Biology
Life, its origin, and its distribution: a perspective from the Conway-Kochen Theorem and the Free Energy Principle

Chris Fields, Michael Levin
February 1, 2025
Review of Scientific Instruments
A microfluidic sucrose gap device for electrical measurement of gap junction connectivity

J Dungan, J Mathews, M Levin, V Koomson
January 31, 2025
Science
Randomizing the human genome by engineering recombination between repeat elements

Jonas Koeppel, Raphael Ferreira, Thomas Vanderstichele, Lisa Maria Riedmayr, Elin Madli Peets, Gareth Girling, Juliane Weller, Pierre Murat, Fabio Giuseppe Liberante, Tom Ellis, George McDonald Church, Leopold Parts
January 31, 2025
Journal of Control Release
Immobilization of BMP-2 in porous hydrogels to spatially regulate osteogenesis

Junzhe Lou, Charlotte Meyer, Anqi Chen, David A Weitz, David J Mooney
February 1, 2025
SLAS Discovery
Comparative evaluation of cell-based assay technologies for scoring drug-induced condensation of SARS-CoV-2 nucleocapsid protein

Rui Tong Quek, Cyna R Shirazinejad, Christina L Young, Kierra S Hardy, Samuel Lim, Phillip J Elms, David T McSwiggen, Timothy J Mitchison, Pamela A Silver
January 29, 2025
Nature Portfolio Journal Women's Health
Cervical mucus in linked human Cervix and Vagina Chips modulates vaginal dysbiosis

Ola Gutzeit, Aakanksha Gulati, Zohreh Izadifar, Anna Stejskalova, Hassan Rhbiny, Justin Cotton, Bogdan Budnik, Sanjid Shahriar, Girija Goyal, Abidemi Junaid, Donald E Ingber
February 5, 2025
Lab on a Chip
TapeTech microfluidic connectors: adhesive tape-enabled solution for organ-on-a-chip system integration

Terry Chin, Abraham C I van Steen, Delaney Gray-Scherr, Jessica L Teo, Anish Vasan, Joshua Jeon, Jessica Shah, Aayush Pate, Amy E Stoddard, Jennifer L Bays, Jeroen Eyckmans, Christopher S Chen
January 23, 2025
EMBO Reports
Rapid human oogonia-like cell specification via transcription factor-directed differentiation

Merrick Pierson Smela, Christian C Kramme, Patrick R J Fortuna, Bennett Wolf, Shrey Goel, Jessica Adams, Carl Ma, Sergiy Velychko, Ursula Widocki, Venkata Srikar Kavirayuni, Tianlai Chen, Sophia Vincoff, Edward Dong, Richie E Kohman, Mutsumi Kobayashi, Toshi Shioda, George M Church, Pranam Chatterjee
February 26, 2024
Nature Reviews Bioengineering
Machine learning for antimicrobial peptide identification and design

Fangping Wan, Felix Wong, James J Collins, Cesar de la Fuente-Nunez
January 26, 2025
Advanced Materials
Coaxial Direct Ink Writing of Cholesteric Liquid Crystal Elastomers in 3D Architectures

Alicia Ng, Rodrigo Telles, Katherine S Riley, Jennifer A Lewis, Caitlyn C Cook, Elaine Lee, Shu Yang
January 17, 2025
Physics of Life Reviews
Thoughts and thinkers: On the complementarity between objects and processes

Chris Fields, Michael Levin
January 27, 2025
Current Opinion in Biotechnology
Machine learning for synthetic gene circuit engineering

Sebastian Palacios, James J Collins, Domitilla Del Vecchio
January 17, 2025
ALTEX Alternatives to Animal Experimentation
Biology-inspired dynamic microphysiological system approaches to revolutionize basic research, healthcare and animal welfare

Uwe Marx, Sonja Beken, Zaozao Chen, Eva-Maria Dehne, Ann Doherty, Lorna Ewart, Suzanne C. Fitzpatrick, Linda G. Griffith, Zhongze Gu, Thomas Hartung, James Hickman, Donald E. Ingber, Seiichi Ishida, Jayoung Jeong, Marcel Leist, Lisa Levin, Donna L. Mendrick, Giorgia Pallocca, Stefan Platz, Marian Raschke, Lena Smirnova, Danilo A. Tagle, Martin Trapecar, Bas W. M. van Balkom, Janny van den Eijnden-van Raaij, Andries van der Meer, Adrian Roth